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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183728418
PJTQ01000046
205770
Gammaproteobacteria
ACG
Arg
>WENV183728419
PJTQ01000046
205770
Gammaproteobacteria
ACG
Arg
>WENV183728420
PJTQ01000046
205770
Gammaproteobacteria
ACG
Arg
>WENV183728421
PJTQ01000046
205770
Gammaproteobacteria
ACG
Arg
>WENV183728801
PJTQ01000457
117930
Gammaproteobacteria
CAA
Leu
>WENV183729010
PJTQ01002237
73558
Gammaproteobacteria
CAG
Leu
>WENV183728597
PJTQ01000168
176627
Gammaproteobacteria
CCG
Arg
>WENV183729475
PJTQ01046325
176627
Gammaproteobacteria
CCG
Arg
>WENV183728422
PJTQ01000046
179074
Gammaproteobacteria
CCT
Arg
>WENV183728846
PJTQ01000683
20224
Gammaproteobacteria
CGA
Ser
>WENV183728909
PJTQ01001096
444138
Gammaproteobacteria
CTG
Gln
>WENV183729041
PJTQ01003079
123335
Gammaproteobacteria
GAG
Leu
>WENV183728649
PJTQ01000235
74718
Gammaproteobacteria
GAG
Leu
>WENV183728417
PJTQ01000046
20472
Gammaproteobacteria
GCT
Ser
>WENV183728876
PJTQ01000839
60942
Gammaproteobacteria
GGA
Ser
>WENV183728778
PJTQ01000427
29777
Gammaproteobacteria
GGA
Ser
>WENV183729149
PJTQ01007031
29777
Gammaproteobacteria
GGA
Ser
>WENV183728886
PJTQ01001029
185120
Gammaproteobacteria
GGG
Pro
>WENV183729036
PJTQ01002909
192143
Gammaproteobacteria
GGG
Pro
>WENV183729138
PJTQ01006285
293662
Gammaproteobacteria
GGT
Thr
>WENV183729574
PJTQ01074403
313549
Gammaproteobacteria
GTG
His
>WENV183728541
PJTQ01000120
118322
Gammaproteobacteria
TAA
Leu
>WENV183729341
PJTQ01024886
118322
Gammaproteobacteria
TAA
Leu
>WENV183729012
PJTQ01002274
416836
Gammaproteobacteria
TAC
Val
>WENV183728348
PJTQ01000023
118321
Gammaproteobacteria
TAG
Leu
>WENV183729575
PJTQ01074403
118321
Gammaproteobacteria
TAG
Leu
>WENV183728569
PJTQ01000143
63595
Gammaproteobacteria
TGA
Ser
>WENV183728642
PJTQ01000222
330651
Gammaproteobacteria
TGT
Thr
>WENV183729317
PJTQ01021512
330651
Gammaproteobacteria
TGT
Thr
>WENV183728868
PJTQ01000785
280687
Gammaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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