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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183732036
PJTV01000001
20224
Gammaproteobacteria
CGA
Ser
>WENV183732052
PJTV01000002
400267
Gammaproteobacteria
CTG
Gln
>WENV183732053
PJTV01000002
480983
Gammaproteobacteria
CCC
Gly
>WENV183732062
PJTV01000004
301035
Gammaproteobacteria
CAT
Met
>WENV183732065
PJTV01000005
192143
Gammaproteobacteria
GGG
Pro
>WENV183732064
PJTV01000005
398941
Gammaproteobacteria
CTC
Glu
>WENV183732070
PJTV01000006
480367
Gammaproteobacteria
GCA
Cys
>WENV183732073
PJTV01000006
400083
Gammaproteobacteria
CAC
Val
>WENV183732079
PJTV01000007
118083
Gammaproteobacteria
CAG
Leu
>WENV183732132
PJTV01000796
404084
Gammaproteobacteria
CTG
Gln
>WENV183732127
PJTV01000796
194705
Gammaproteobacteria
CAT
Met
>WENV183732155
PJTV01002030
77793
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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