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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183732479
PJTX01000922
180999
Gammaproteobacteria
CAT
Met
>WENV183732680
PJTX01006121
180999
Gammaproteobacteria
CAT
Met
>WENV183732318
PJTX01000010
20224
Gammaproteobacteria
CGA
Ser
>WENV183732363
PJTX01000054
8575
Gammaproteobacteria
GCT
Ser
>WENV183732681
PJTX01006121
404084
Gammaproteobacteria
CTG
Gln
>WENV183732682
PJTX01006121
404084
Gammaproteobacteria
CTG
Gln
>WENV183732401
PJTX01000112
480367
Gammaproteobacteria
GCA
Cys
>WENV183732792
PJTX01015049
184467
Gammaproteobacteria
TCT
Arg
>WENV183732600
PJTX01003112
401696
Gammaproteobacteria
TTG
Gln
>WENV183732636
PJTX01004250
401696
Gammaproteobacteria
TTG
Gln
>WENV183732340
PJTX01000032
400267
Gammaproteobacteria
CTG
Gln
>WENV183732538
PJTX01001795
401199
Gammaproteobacteria
TCC
Gly
>WENV183732472
PJTX01000683
176627
Gammaproteobacteria
CCG
Arg
>WENV183732662
PJTX01005073
185197
Gammaproteobacteria
GAC
Val
>WENV183732743
PJTX01010035
74049
Gammaproteobacteria
CAG
Leu
>WENV183732599
PJTX01003104
289050
Gammaproteobacteria
CCA
Trp
>WENV183732511
PJTX01001330
286016
Gammaproteobacteria
TTT
Lys
>WENV183732512
PJTX01001330
286016
Gammaproteobacteria
TTT
Lys
>WENV183732518
PJTX01001409
286016
Gammaproteobacteria
TTT
Lys
>WENV183732691
PJTX01006377
286016
Gammaproteobacteria
TTT
Lys
>WENV183732693
PJTX01006377
286016
Gammaproteobacteria
TTT
Lys
>WENV183732695
PJTX01006377
286016
Gammaproteobacteria
TTT
Lys
>WENV183732814
PJTX01017456
286016
Gammaproteobacteria
TTT
Lys
>WENV183732405
PJTX01000113
398941
Gammaproteobacteria
CTC
Glu
>WENV183732301
PJTX01000001
480983
Gammaproteobacteria
CCC
Gly
>WENV183732390
PJTX01000093
176048
Gammaproteobacteria
GGG
Pro
>WENV183732607
PJTX01003420
118322
Gammaproteobacteria
TAA
Leu
>WENV183732573
PJTX01002659
20472
Gammaproteobacteria
GCT
Ser
>WENV183732501
PJTX01001174
29777
Gammaproteobacteria
GGA
Ser
>WENV183732469
PJTX01000615
76278
Gammaproteobacteria
TAA
Leu
>WENV183732535
PJTX01001764
76278
Gammaproteobacteria
TAA
Leu
>WENV183732644
PJTX01004632
117930
Gammaproteobacteria
CAA
Leu
>WENV183732391
PJTX01000093
282696
Gammaproteobacteria
GAA
Phe
>WENV183732404
PJTX01000112
400083
Gammaproteobacteria
CAC
Val
>WENV183732683
PJTX01006137
179074
Gammaproteobacteria
CCT
Arg
>WENV183732794
PJTX01015049
118321
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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