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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183733114
PJTY01000079
205770
Gammaproteobacteria
ACG
Arg
>WENV183733115
PJTY01000079
205770
Gammaproteobacteria
ACG
Arg
>WENV183733116
PJTY01000079
205770
Gammaproteobacteria
ACG
Arg
>WENV183733117
PJTY01000079
205770
Gammaproteobacteria
ACG
Arg
>WENV183733291
PJTY01000697
205770
Gammaproteobacteria
ACG
Arg
>WENV183733292
PJTY01000697
205770
Gammaproteobacteria
ACG
Arg
>WENV183733252
PJTY01000507
117930
Gammaproteobacteria
CAA
Leu
>WENV183733262
PJTY01000537
117930
Gammaproteobacteria
CAA
Leu
>WENV183733274
PJTY01000635
231805
Gammaproteobacteria
CAT
Met
>WENV183733275
PJTY01000635
231805
Gammaproteobacteria
CAT
Met
>WENV183733276
PJTY01000635
231805
Gammaproteobacteria
CAT
Met
>WENV183733345
PJTY01001260
231805
Gammaproteobacteria
CAT
Met
>WENV183733346
PJTY01001260
231805
Gammaproteobacteria
CAT
Met
>WENV183733488
PJTY01002734
231805
Gammaproteobacteria
CAT
Met
>WENV183733565
PJTY01004861
231805
Gammaproteobacteria
CAT
Met
>WENV183733848
PJTY01037341
231805
Gammaproteobacteria
CAT
Met
>WENV183733849
PJTY01037341
231805
Gammaproteobacteria
CAT
Met
>WENV183733379
PJTY01001436
480983
Gammaproteobacteria
CCC
Gly
>WENV183733213
PJTY01000290
176627
Gammaproteobacteria
CCG
Arg
>WENV183733331
PJTY01001141
176627
Gammaproteobacteria
CCG
Arg
>WENV183733293
PJTY01000697
179074
Gammaproteobacteria
CCT
Arg
>WENV183733388
PJTY01001497
23966
Gammaproteobacteria
CGA
Ser
>WENV183733321
PJTY01001022
315947
Gammaproteobacteria
CGC
Ala
>WENV183733550
PJTY01004372
400267
Gammaproteobacteria
CTG
Gln
>WENV183733239
PJTY01000405
435648
Gammaproteobacteria
CTG
Gln
>WENV183733240
PJTY01000405
435648
Gammaproteobacteria
CTG
Gln
>WENV183733068
PJTY01000040
184266
Gammaproteobacteria
GAC
Val
>WENV183733384
PJTY01001453
480367
Gammaproteobacteria
GCA
Cys
>WENV183733113
PJTY01000079
20472
Gammaproteobacteria
GCT
Ser
>WENV183733289
PJTY01000697
20472
Gammaproteobacteria
GCT
Ser
>WENV183733232
PJTY01000396
29777
Gammaproteobacteria
GGA
Ser
>WENV183733288
PJTY01000684
29777
Gammaproteobacteria
GGA
Ser
>WENV183733357
PJTY01001310
192143
Gammaproteobacteria
GGG
Pro
>WENV183733317
PJTY01001008
235175
Gammaproteobacteria
GTC
Asp
>WENV183733340
PJTY01001208
235175
Gammaproteobacteria
GTC
Asp
>WENV183733341
PJTY01001208
235175
Gammaproteobacteria
GTC
Asp
>WENV183733418
PJTY01001827
235175
Gammaproteobacteria
GTC
Asp
>WENV183733604
PJTY01006271
235175
Gammaproteobacteria
GTC
Asp
>WENV183733625
PJTY01007806
235175
Gammaproteobacteria
GTC
Asp
>WENV183733645
PJTY01008701
235175
Gammaproteobacteria
GTC
Asp
>WENV183733875
PJTY01038817
235175
Gammaproteobacteria
GTC
Asp
>WENV183733607
PJTY01006440
218310
Gammaproteobacteria
GTG
His
>WENV183733156
PJTY01000136
118322
Gammaproteobacteria
TAA
Leu
>WENV183733198
PJTY01000234
118322
Gammaproteobacteria
TAA
Leu
>WENV183733064
PJTY01000040
117788
Gammaproteobacteria
TAG
Leu
>WENV183733066
PJTY01000040
117788
Gammaproteobacteria
TAG
Leu
>WENV183733629
PJTY01008041
118321
Gammaproteobacteria
TAG
Leu
>WENV183733678
PJTY01011212
118321
Gammaproteobacteria
TAG
Leu
>WENV183733824
PJTY01032093
118321
Gammaproteobacteria
TAG
Leu
>WENV183733228
PJTY01000385
63595
Gammaproteobacteria
TGA
Ser
>WENV183733263
PJTY01000539
63595
Gammaproteobacteria
TGA
Ser
>WENV183733313
PJTY01000968
330651
Gammaproteobacteria
TGT
Thr
>WENV183733316
PJTY01001001
330651
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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