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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183734768
PJUA01000005
20224
Gammaproteobacteria
CGA
Ser
>WENV183734734
PJUA01000001
8575
Gammaproteobacteria
GCT
Ser
>WENV183734810
PJUA01000024
480367
Gammaproteobacteria
GCA
Cys
>WENV183734814
PJUA01000025
400267
Gammaproteobacteria
CTG
Gln
>WENV183734818
PJUA01000031
398941
Gammaproteobacteria
CTC
Glu
>WENV183734729
PJUA01000001
480983
Gammaproteobacteria
CCC
Gly
>WENV183734819
PJUA01000031
176048
Gammaproteobacteria
GGG
Pro
>WENV183735392
PJUA01021606
117930
Gammaproteobacteria
CAA
Leu
>WENV183734820
PJUA01000031
282696
Gammaproteobacteria
GAA
Phe
>WENV183734813
PJUA01000024
400083
Gammaproteobacteria
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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