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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183735408
PJUB01000001
480983
Gammaproteobacteria
CCC
Gly
>WENV183735425
PJUB01000003
63595
Gammaproteobacteria
TGA
Ser
>WENV183735430
PJUB01000003
118322
Gammaproteobacteria
TAA
Leu
>WENV183735447
PJUB01000007
218310
Gammaproteobacteria
GTG
His
>WENV183735452
PJUB01000007
23966
Gammaproteobacteria
CGA
Ser
>WENV183735471
PJUB01000012
29777
Gammaproteobacteria
GGA
Ser
>WENV183735487
PJUB01000013
117930
Gammaproteobacteria
CAA
Leu
>WENV183735497
PJUB01000017
330651
Gammaproteobacteria
TGT
Thr
>WENV183735498
PJUB01000017
176627
Gammaproteobacteria
CCG
Arg
>WENV183735510
PJUB01000025
315947
Gammaproteobacteria
CGC
Ala
>WENV183735512
PJUB01000025
480367
Gammaproteobacteria
GCA
Cys
>WENV183735518
PJUB01000026
118321
Gammaproteobacteria
TAG
Leu
>WENV183735526
PJUB01000028
20472
Gammaproteobacteria
GCT
Ser
>WENV183735527
PJUB01000028
205770
Gammaproteobacteria
ACG
Arg
>WENV183735528
PJUB01000028
205770
Gammaproteobacteria
ACG
Arg
>WENV183735529
PJUB01000029
400267
Gammaproteobacteria
CTG
Gln
>WENV183735533
PJUB01000034
192143
Gammaproteobacteria
GGG
Pro
>WENV183735574
PJUB01000064
205770
Gammaproteobacteria
ACG
Arg
>WENV183735575
PJUB01000064
205770
Gammaproteobacteria
ACG
Arg
>WENV183735576
PJUB01000064
179074
Gammaproteobacteria
CCT
Arg
>WENV183735924
PJUB01012588
210406
Gammaproteobacteria
ACG
Arg
>WENV183735925
PJUB01012588
210406
Gammaproteobacteria
ACG
Arg
>WENV183735998
PJUB01027367
205778
Gammaproteobacteria
GTC
Asp
>WENV183736008
PJUB01031409
205770
Gammaproteobacteria
ACG
Arg
>WENV183736009
PJUB01031409
205770
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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