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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183736053
PJUC01000005
23966
Gammaproteobacteria
CGA
Ser
>WENV183736086
PJUC01000021
480367
Gammaproteobacteria
GCA
Cys
>WENV183736101
PJUC01000026
400267
Gammaproteobacteria
CTG
Gln
>WENV183736106
PJUC01000029
192143
Gammaproteobacteria
GGG
Pro
>WENV183736084
PJUC01000021
371167
Gammaproteobacteria
CGC
Ala
>WENV183736030
PJUC01000003
480983
Gammaproteobacteria
CCC
Gly
>WENV183736048
PJUC01000005
218310
Gammaproteobacteria
GTG
His
>WENV183736616
PJUC01023700
118322
Gammaproteobacteria
TAA
Leu
>WENV183736652
PJUC01035333
205770
Gammaproteobacteria
ACG
Arg
>WENV183736518
PJUC01008144
444138
Gammaproteobacteria
CTG
Gln
>WENV183736621
PJUC01025469
179074
Gammaproteobacteria
CCT
Arg
>WENV183736562
PJUC01013358
86665
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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