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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183742569
PJUI01000018
29777
Gammaproteobacteria
GGA
Ser
>WENV183742596
PJUI01000021
330651
Gammaproteobacteria
TGT
Thr
>WENV183742597
PJUI01000021
176627
Gammaproteobacteria
CCG
Arg
>WENV183742639
PJUI01000039
118322
Gammaproteobacteria
TAA
Leu
>WENV183742640
PJUI01000039
63595
Gammaproteobacteria
TGA
Ser
>WENV183742665
PJUI01000052
117930
Gammaproteobacteria
CAA
Leu
>WENV183742671
PJUI01000056
20472
Gammaproteobacteria
GCT
Ser
>WENV183742672
PJUI01000056
205770
Gammaproteobacteria
ACG
Arg
>WENV183742673
PJUI01000056
205770
Gammaproteobacteria
ACG
Arg
>WENV183742739
PJUI01000087
118321
Gammaproteobacteria
TAG
Leu
>WENV183742773
PJUI01000151
192143
Gammaproteobacteria
GGG
Pro
>WENV183742776
PJUI01000155
23966
Gammaproteobacteria
CGA
Ser
>WENV183742779
PJUI01000155
218310
Gammaproteobacteria
GTG
His
>WENV183742802
PJUI01000227
480367
Gammaproteobacteria
GCA
Cys
>WENV183742809
PJUI01000249
480983
Gammaproteobacteria
CCC
Gly
>WENV183742814
PJUI01000330
400267
Gammaproteobacteria
CTG
Gln
>WENV183742816
PJUI01000350
371167
Gammaproteobacteria
CGC
Ala
>WENV183742825
PJUI01000376
205770
Gammaproteobacteria
ACG
Arg
>WENV183742826
PJUI01000376
205770
Gammaproteobacteria
ACG
Arg
>WENV183742827
PJUI01000376
179074
Gammaproteobacteria
CCT
Arg
>WENV183742943
PJUI01018148
205770
Gammaproteobacteria
ACG
Arg
>WENV183742944
PJUI01018148
205770
Gammaproteobacteria
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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