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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183742964
PJUJ01000001
480983
Gammaproteobacteria
CCC
Gly
>WENV183742991
PJUJ01000005
176627
Gammaproteobacteria
CCG
Arg
>WENV183743142
PJUJ01000051
399050
Gammaproteobacteria
CCT
Arg
>WENV183743000
PJUJ01000006
23966
Gammaproteobacteria
CGA
Ser
>WENV183743164
PJUJ01000070
315947
Gammaproteobacteria
CGC
Ala
>WENV183743002
PJUJ01000007
176241
Gammaproteobacteria
CGG
Pro
>WENV183742963
PJUJ01000001
400267
Gammaproteobacteria
CTG
Gln
>WENV183743160
PJUJ01000070
480367
Gammaproteobacteria
GCA
Cys
>WENV183743069
PJUJ01000020
29419
Gammaproteobacteria
GGA
Ser
>WENV183743093
PJUJ01000030
192143
Gammaproteobacteria
GGG
Pro
>WENV183743485
PJUJ01002113
280876
Gammaproteobacteria
GGT
Thr
>WENV183743483
PJUJ01002113
117821
Gammaproteobacteria
GTA
Tyr
>WENV183743106
PJUJ01000038
280882
Gammaproteobacteria
GTG
His
>WENV183742995
PJUJ01000006
218310
Gammaproteobacteria
GTG
His
>WENV183743111
PJUJ01000039
73063
Gammaproteobacteria
TAA
Leu
>WENV183743108
PJUJ01000039
56108
Gammaproteobacteria
TGA
Ser
>WENV183743210
PJUJ01000157
176244
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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