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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183744496
PJUL01000001
23966
Gammaproteobacteria
CGA
Ser
>WENV183744508
PJUL01000001
218310
Gammaproteobacteria
GTG
His
>WENV183744512
PJUL01000002
400267
Gammaproteobacteria
CTG
Gln
>WENV183744513
PJUL01000002
480983
Gammaproteobacteria
CCC
Gly
>WENV183744534
PJUL01000006
176627
Gammaproteobacteria
CCG
Arg
>WENV183744604
PJUL01000023
29419
Gammaproteobacteria
GGA
Ser
>WENV183744644
PJUL01000042
192143
Gammaproteobacteria
GGG
Pro
>WENV183744652
PJUL01000047
315947
Gammaproteobacteria
CGC
Ala
>WENV183744654
PJUL01000047
480367
Gammaproteobacteria
GCA
Cys
>WENV183744661
PJUL01000052
280882
Gammaproteobacteria
GTG
His
>WENV183744665
PJUL01000054
56108
Gammaproteobacteria
TGA
Ser
>WENV183744668
PJUL01000054
73063
Gammaproteobacteria
TAA
Leu
>WENV183744688
PJUL01000065
399050
Gammaproteobacteria
CCT
Arg
>WENV183744706
PJUL01000076
176241
Gammaproteobacteria
CGG
Pro
>WENV183744767
PJUL01000203
176244
Gammaproteobacteria
TGG
Pro
>WENV183745132
PJUL01002911
117821
Gammaproteobacteria
GTA
Tyr
>WENV183745134
PJUL01002911
280876
Gammaproteobacteria
GGT
Thr
>WENV183745195
PJUL01005305
315947
Gammaproteobacteria
CGC
Ala
>WENV183745279
PJUL01014591
118414
Gammaproteobacteria
TAG
Leu
>WENV183745338
PJUL01027745
293662
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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