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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183747901
PPFU01002411
73558
Gammaproteobacteria
CAG
Leu
>WENV183749851
PPFU01221531
86665
Gammaproteobacteria
CAG
Leu
>WENV183747909
PPFU01002739
178442
Gammaproteobacteria
CCT
Arg
>WENV183747922
PPFU01003023
20224
Gammaproteobacteria
CGA
Ser
>WENV183747929
PPFU01003183
400267
Gammaproteobacteria
CTG
Gln
>WENV183747908
PPFU01002732
444138
Gammaproteobacteria
CTG
Gln
>WENV183750246
PPFU01276068
280812
Gammaproteobacteria
GAA
Phe
>WENV183747889
PPFU01001952
118273
Gammaproteobacteria
GAG
Leu
>WENV183749404
PPFU01165593
293662
Gammaproteobacteria
GGT
Thr
>WENV183750035
PPFU01249612
338424
Gammaproteobacteria
TAC
Val
>WENV183749447
PPFU01170890
398939
Gammaproteobacteria
TAC
Val
>WENV183748112
PPFU01012365
416836
Gammaproteobacteria
TAC
Val
>WENV183748149
PPFU01015462
117771
Gammaproteobacteria
TAG
Leu
>WENV183747987
PPFU01005353
280681
Gammaproteobacteria
TGT
Thr
>WENV183747905
PPFU01002528
280687
Gammaproteobacteria
TTC
Glu
>WENV183748935
PPFU01099833
280687
Gammaproteobacteria
TTC
Glu
>WENV183750382
PPFU01294561
280687
Gammaproteobacteria
TTC
Glu
>WENV183749813
PPFU01215790
290068
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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