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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170092941
CEAH01004422
188874
Thermodesulfobacteriota
TTC
Glu
>WENV170092969
CEAH01005786
183758
Thermodesulfobacteriota
CCA
Trp
>WENV170093022
CEAH01008141
407608
Thermodesulfobacteriota
TTG
Gln
>WENV170093222
CEAH01016455
295271
Thermodesulfobacteriota
TTT
Lys
>WENV170093318
CEAH01021012
175867
Thermodesulfobacteriota
GGG
Pro
>WENV170093411
CEAH01024671
295177
Thermodesulfobacteriota
CTT
Lys
>WENV170093412
CEAH01024671
295177
Thermodesulfobacteriota
CTT
Lys
>WENV170093413
CEAH01024671
295177
Thermodesulfobacteriota
CTT
Lys
>WENV170093414
CEAH01024671
295177
Thermodesulfobacteriota
CTT
Lys
>WENV170093553
CEAH01030285
188874
Thermodesulfobacteriota
TTC
Glu
>WENV170093652
CEAH01033638
214925
Thermodesulfobacteriota
GTC
Asp
>WENV170093653
CEAH01033638
214925
Thermodesulfobacteriota
GTC
Asp
>WENV170093765
CEAH01039093
214925
Thermodesulfobacteriota
GTC
Asp
>WENV170093876
CEAH01043191
302242
Thermodesulfobacteriota
GAA
Phe
>WENV170094169
CEAH01059794
188874
Thermodesulfobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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