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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170419066
CEUM01093078
80211
Thermodesulfobacteriota
CAG
Leu
>WENV170419195
CEUM01106584
304145
Thermodesulfobacteriota
CAT
Met
>WENV170419703
CEUM01136299
304141
Thermodesulfobacteriota
CTC
Glu
>WENV170419814
CEUM01137962
304140
Thermodesulfobacteriota
CTT
Lys
>WENV170419774
CEUM01137570
413601
Thermodesulfobacteriota
GAC
Val
>WENV170418951
CEUM01083224
77857
Thermodesulfobacteriota
GAG
Leu
>WENV170418653
CEUM01058685
413602
Thermodesulfobacteriota
GCA
Cys
>WENV170418527
CEUM01048080
304139
Thermodesulfobacteriota
GGC
Ala
>WENV170419413
CEUM01125723
304139
Thermodesulfobacteriota
GGC
Ala
>WENV170418631
CEUM01056742
200297
Thermodesulfobacteriota
GGG
Pro
>WENV170419212
CEUM01108529
122347
Thermodesulfobacteriota
TAG
Leu
>WENV170417767
CEUM01001982
304142
Thermodesulfobacteriota
TGC
Ala
>WENV170418750
CEUM01064556
159099
Thermodesulfobacteriota
TTC
Glu
>WENV170418751
CEUM01064556
159099
Thermodesulfobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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