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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183501263
OMGS01000007
407608
Thermodesulfobacteriota
TTG
Gln
>WENV183501599
OMGS01001033
406378
Thermodesulfobacteriota
CCC
Gly
>WENV183501568
OMGS01000706
214925
Thermodesulfobacteriota
GTC
Asp
>WENV183501567
OMGS01000706
293149
Thermodesulfobacteriota
CAC
Val
>WENV183501342
OMGS01000078
101766
Thermodesulfobacteriota
GTA
Tyr
>WENV183501444
OMGS01000240
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183501317
OMGS01000046
295177
Thermodesulfobacteriota
CTT
Lys
>WENV183501265
OMGS01000007
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183501374
OMGS01000118
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183501341
OMGS01000078
356383
Thermodesulfobacteriota
TGT
Thr
>WENV183501344
OMGS01000078
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183501627
OMGS01001503
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183501355
OMGS01000092
295466
Thermodesulfobacteriota
CGC
Ala
>WENV183501322
OMGS01000050
295271
Thermodesulfobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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