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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183574091
OOCH01002613
407608
Thermodesulfobacteriota
TTG
Gln
>WENV183574019
OOCH01002022
214925
Thermodesulfobacteriota
GTC
Asp
>WENV183574538
OOCH01023568
101766
Thermodesulfobacteriota
GTA
Tyr
>WENV183573834
OOCH01000994
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183574111
OOCH01002775
295177
Thermodesulfobacteriota
CTT
Lys
>WENV183573969
OOCH01001744
294203
Thermodesulfobacteriota
GGC
Ala
>WENV183573990
OOCH01001842
294203
Thermodesulfobacteriota
GGC
Ala
>WENV183574355
OOCH01008526
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183574376
OOCH01009858
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183573844
OOCH01001029
432790
Thermodesulfobacteriota
GCA
Cys
>WENV183573846
OOCH01001029
432790
Thermodesulfobacteriota
GCA
Cys
>WENV183573892
OOCH01001258
302242
Thermodesulfobacteriota
GAA
Phe
>WENV183574188
OOCH01003563
295271
Thermodesulfobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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