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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183603688
OODL01000081
407608
Thermodesulfobacteriota
TTG
Gln
>WENV183603832
OODL01000304
101766
Thermodesulfobacteriota
GTA
Tyr
>WENV183604019
OODL01000849
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183604020
OODL01000849
175867
Thermodesulfobacteriota
GGG
Pro
>WENV183604149
OODL01001369
295177
Thermodesulfobacteriota
CTT
Lys
>WENV183604359
OODL01003488
295177
Thermodesulfobacteriota
CTT
Lys
>WENV183604276
OODL01002262
294203
Thermodesulfobacteriota
GGC
Ala
>WENV183604415
OODL01004694
294203
Thermodesulfobacteriota
GGC
Ala
>WENV183604429
OODL01005207
289834
Thermodesulfobacteriota
GAA
Phe
>WENV183604017
OODL01000843
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183604080
OODL01001072
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183604246
OODL01001943
188874
Thermodesulfobacteriota
TTC
Glu
>WENV183603834
OODL01000304
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183604762
OODL01049602
183758
Thermodesulfobacteriota
CCA
Trp
>WENV183604059
OODL01000977
295271
Thermodesulfobacteriota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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