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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183429977
OMBP01001916
57652
Verrucomicrobiota
TGA
Ser
>WENV183429993
OMBP01002135
187548
Verrucomicrobiota
TCT
Arg
>WENV183430005
OMBP01002405
229220
Verrucomicrobiota
CAT
Met
>WENV183430023
OMBP01002564
101463
Verrucomicrobiota
TAA
Leu
>WENV183430024
OMBP01002564
292636
Verrucomicrobiota
>WENV183430025
OMBP01002578
293095
Verrucomicrobiota
TTT
Lys
>WENV183430047
OMBP01002868
406368
Verrucomicrobiota
TTG
Gln
>WENV183430052
OMBP01002914
75458
Verrucomicrobiota
CAG
Leu
>WENV183430082
OMBP01003634
120352
Verrucomicrobiota
TAG
Leu
>WENV183430084
OMBP01003704
405901
Verrucomicrobiota
GCC
Gly
>WENV183430124
OMBP01004898
406037
Verrucomicrobiota
GTG
His
>WENV183430128
OMBP01005051
293125
Verrucomicrobiota
GAA
Phe
>WENV183430129
OMBP01005060
187561
Verrucomicrobiota
CGG
Pro
>WENV183430163
OMBP01006191
406360
Verrucomicrobiota
GAC
Val
>WENV183430179
OMBP01006959
101600
Verrucomicrobiota
AAG
Leu
>WENV183430183
OMBP01007273
406336
Verrucomicrobiota
CCT
Arg
>WENV183430186
OMBP01007623
21159
Verrucomicrobiota
GGA
Ser
>WENV183430193
OMBP01008015
483642
Verrucomicrobiota
CCC
Gly
>WENV183430195
OMBP01008243
303305
Verrucomicrobiota
GGC
Ala
>WENV183430197
OMBP01008400
406039
Verrucomicrobiota
CAC
Val
>WENV183430208
OMBP01009105
298263
Verrucomicrobiota
TTC
Glu
>WENV183430210
OMBP01009238
101461
Verrucomicrobiota
GTA
Tyr
>WENV183430212
OMBP01009351
293105
Verrucomicrobiota
CAT
Met
>WENV183430214
OMBP01009500
406369
Verrucomicrobiota
CCG
Arg
>WENV183430215
OMBP01009510
187556
Verrucomicrobiota
GGG
Pro
>WENV183430290
OMBP01017604
405940
Verrucomicrobiota
GGT
Thr
>WENV183430291
OMBP01017626
406040
Verrucomicrobiota
CGT
Thr
>WENV183430292
OMBP01017626
293069
Verrucomicrobiota
CTT
Lys
>WENV183430297
OMBP01018854
406044
Verrucomicrobiota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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