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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183462645
OMDX01000001
303305
Verrucomicrobiota
GGC
Ala
>WENV183462646
OMDX01000001
406039
Verrucomicrobiota
CAC
Val
>WENV183462648
OMDX01000003
406336
Verrucomicrobiota
CCT
Arg
>WENV183462649
OMDX01000003
120352
Verrucomicrobiota
TAG
Leu
>WENV183462650
OMDX01000005
406350
Verrucomicrobiota
TGT
Thr
>WENV183462651
OMDX01000005
293079
Verrucomicrobiota
CGC
Ala
>WENV183462656
OMDX01000017
405901
Verrucomicrobiota
GCC
Gly
>WENV183462659
OMDX01000033
157427
Verrucomicrobiota
GTC
Asp
>WENV183462660
OMDX01000035
187556
Verrucomicrobiota
GGG
Pro
>WENV183462666
OMDX01000047
405940
Verrucomicrobiota
GGT
Thr
>WENV183462671
OMDX01000057
406040
Verrucomicrobiota
CGT
Thr
>WENV183462672
OMDX01000057
293069
Verrucomicrobiota
CTT
Lys
>WENV183462675
OMDX01000069
8960
Verrucomicrobiota
CGA
Ser
>WENV183462688
OMDX01000107
229220
Verrucomicrobiota
CAT
Met
>WENV183462694
OMDX01000157
101600
Verrucomicrobiota
AAG
Leu
>WENV183462697
OMDX01000178
406368
Verrucomicrobiota
TTG
Gln
>WENV183462701
OMDX01000192
406346
Verrucomicrobiota
TAC
Val
>WENV183462704
OMDX01000196
293095
Verrucomicrobiota
TTT
Lys
>WENV183462714
OMDX01000241
406369
Verrucomicrobiota
CCG
Arg
>WENV183462715
OMDX01000246
483642
Verrucomicrobiota
CCC
Gly
>WENV183462716
OMDX01000246
507474
Verrucomicrobiota
TCC
Gly
>WENV183462726
OMDX01000271
148006
Verrucomicrobiota
CAA
Leu
>WENV183462742
OMDX01000352
293125
Verrucomicrobiota
GAA
Phe
>WENV183462743
OMDX01000352
186928
Verrucomicrobiota
TGG
Pro
>WENV183462756
OMDX01000439
157427
Verrucomicrobiota
GTC
Asp
>WENV183462791
OMDX01000651
298263
Verrucomicrobiota
TTC
Glu
>WENV183462793
OMDX01000683
298263
Verrucomicrobiota
TTC
Glu
>WENV183462796
OMDX01000700
57652
Verrucomicrobiota
TGA
Ser
>WENV183462810
OMDX01000891
8938
Verrucomicrobiota
GCT
Ser
>WENV183462815
OMDX01000968
75458
Verrucomicrobiota
CAG
Leu
>WENV183462865
OMDX01001732
406043
Verrucomicrobiota
GCA
Cys
>WENV183462886
OMDX01002161
406351
Verrucomicrobiota
GTT
Asn
>WENV183462949
OMDX01003525
187561
Verrucomicrobiota
CGG
Pro
>WENV183462958
OMDX01004283
101463
Verrucomicrobiota
TAA
Leu
>WENV183462997
OMDX01005570
406037
Verrucomicrobiota
GTG
His
>WENV183463049
OMDX01008538
292636
Verrucomicrobiota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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