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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183542442
OOAM01003836
292636
Verrucomicrobiota
>WENV183542591
OOAM01009140
148006
Verrucomicrobiota
CAA
Leu
>WENV183542476
OOAM01004596
406039
Verrucomicrobiota
CAC
Val
>WENV183542619
OOAM01010726
75458
Verrucomicrobiota
CAG
Leu
>WENV183542475
OOAM01004589
204388
Verrucomicrobiota
CAT
Met
>WENV183542571
OOAM01008210
293105
Verrucomicrobiota
CAT
Met
>WENV183542532
OOAM01006416
406342
Verrucomicrobiota
CAT
Met
>WENV183542304
OOAM01001758
483642
Verrucomicrobiota
CCC
Gly
>WENV183542177
OOAM01000985
406369
Verrucomicrobiota
CCG
Arg
>WENV183542270
OOAM01001541
406336
Verrucomicrobiota
CCT
Arg
>WENV183542451
OOAM01004010
8960
Verrucomicrobiota
CGA
Ser
>WENV183542712
OOAM01023279
187561
Verrucomicrobiota
CGG
Pro
>WENV183542216
OOAM01001153
406040
Verrucomicrobiota
CGT
Thr
>WENV183542217
OOAM01001153
293069
Verrucomicrobiota
CTT
Lys
>WENV183542568
OOAM01008006
405901
Verrucomicrobiota
GCC
Gly
>WENV183542771
OOAM01038002
303305
Verrucomicrobiota
GGC
Ala
>WENV183542359
OOAM01002637
187556
Verrucomicrobiota
GGG
Pro
>WENV183542263
OOAM01001433
405940
Verrucomicrobiota
GGT
Thr
>WENV183542431
OOAM01003764
157427
Verrucomicrobiota
GTC
Asp
>WENV183542570
OOAM01008210
406037
Verrucomicrobiota
GTG
His
>WENV183542330
OOAM01002104
406351
Verrucomicrobiota
GTT
Asn
>WENV183542441
OOAM01003836
101463
Verrucomicrobiota
TAA
Leu
>WENV183542303
OOAM01001758
489412
Verrucomicrobiota
TCC
Gly
>WENV183542569
OOAM01008133
187548
Verrucomicrobiota
TCT
Arg
>WENV183542287
OOAM01001634
406350
Verrucomicrobiota
TGT
Thr
>WENV183542416
OOAM01003446
298263
Verrucomicrobiota
TTC
Glu
>WENV183542481
OOAM01004897
406368
Verrucomicrobiota
TTG
Gln
>WENV183542454
OOAM01004057
293095
Verrucomicrobiota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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