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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183592166
OOCZ01000002
187556
Verrucomicrobiota
GGG
Pro
>WENV183592167
OOCZ01000002
483642
Verrucomicrobiota
CCC
Gly
>WENV183592168
OOCZ01000002
406369
Verrucomicrobiota
CCG
Arg
>WENV183592169
OOCZ01000002
489412
Verrucomicrobiota
TCC
Gly
>WENV183592170
OOCZ01000002
293125
Verrucomicrobiota
GAA
Phe
>WENV183592171
OOCZ01000002
186928
Verrucomicrobiota
TGG
Pro
>WENV183592172
OOCZ01000002
406336
Verrucomicrobiota
CCT
Arg
>WENV183592173
OOCZ01000003
187548
Verrucomicrobiota
TCT
Arg
>WENV183592193
OOCZ01000014
303305
Verrucomicrobiota
GGC
Ala
>WENV183592194
OOCZ01000014
406039
Verrucomicrobiota
CAC
Val
>WENV183592196
OOCZ01000015
405940
Verrucomicrobiota
GGT
Thr
>WENV183592225
OOCZ01000033
406351
Verrucomicrobiota
GTT
Asn
>WENV183592226
OOCZ01000033
101461
Verrucomicrobiota
GTA
Tyr
>WENV183592245
OOCZ01000048
21159
Verrucomicrobiota
GGA
Ser
>WENV183592263
OOCZ01000067
406350
Verrucomicrobiota
TGT
Thr
>WENV183592264
OOCZ01000067
293079
Verrucomicrobiota
CGC
Ala
>WENV183592281
OOCZ01000082
406040
Verrucomicrobiota
CGT
Thr
>WENV183592282
OOCZ01000082
293069
Verrucomicrobiota
CTT
Lys
>WENV183592283
OOCZ01000082
187561
Verrucomicrobiota
CGG
Pro
>WENV183592285
OOCZ01000085
8960
Verrucomicrobiota
CGA
Ser
>WENV183592303
OOCZ01000110
406346
Verrucomicrobiota
TAC
Val
>WENV183592304
OOCZ01000110
406360
Verrucomicrobiota
GAC
Val
>WENV183592331
OOCZ01000133
405901
Verrucomicrobiota
GCC
Gly
>WENV183592332
OOCZ01000133
298263
Verrucomicrobiota
TTC
Glu
>WENV183592333
OOCZ01000133
406037
Verrucomicrobiota
GTG
His
>WENV183592334
OOCZ01000133
293105
Verrucomicrobiota
CAT
Met
>WENV183592335
OOCZ01000133
406342
Verrucomicrobiota
CAT
Met
>WENV183592378
OOCZ01000162
406044
Verrucomicrobiota
CTG
Gln
>WENV183592418
OOCZ01000238
405901
Verrucomicrobiota
GCC
Gly
>WENV183592424
OOCZ01000254
157427
Verrucomicrobiota
GTC
Asp
>WENV183592447
OOCZ01000317
101463
Verrucomicrobiota
TAA
Leu
>WENV183592448
OOCZ01000317
292636
Verrucomicrobiota
>WENV183592449
OOCZ01000317
8938
Verrucomicrobiota
GCT
Ser
>WENV183592460
OOCZ01000352
293095
Verrucomicrobiota
TTT
Lys
>WENV183592480
OOCZ01000398
57652
Verrucomicrobiota
TGA
Ser
>WENV183592481
OOCZ01000407
229220
Verrucomicrobiota
CAT
Met
>WENV183592514
OOCZ01000560
101600
Verrucomicrobiota
AAG
Leu
>WENV183592562
OOCZ01000825
148006
Verrucomicrobiota
CAA
Leu
>WENV183592620
OOCZ01001041
406368
Verrucomicrobiota
TTG
Gln
>WENV183592627
OOCZ01001139
406043
Verrucomicrobiota
GCA
Cys
>WENV183592628
OOCZ01001139
298263
Verrucomicrobiota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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