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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183722882
PDYJ01000001
406043
Verrucomicrobiota
GCA
Cys
>WENV183722866
PDYJ01000001
293125
Verrucomicrobiota
GAA
Phe
>WENV183722883
PDYJ01000001
406350
Verrucomicrobiota
TGT
Thr
>WENV183722902
PDYJ01000001
148006
Verrucomicrobiota
CAA
Leu
>WENV183722881
PDYJ01000001
101600
Verrucomicrobiota
AAG
Leu
>WENV183722880
PDYJ01000001
293105
Verrucomicrobiota
CAT
Met
>WENV183722872
PDYJ01000001
405901
Verrucomicrobiota
GCC
Gly
>WENV183722877
PDYJ01000001
405901
Verrucomicrobiota
GCC
Gly
>WENV183722905
PDYJ01000001
483642
Verrucomicrobiota
CCC
Gly
>WENV183722860
PDYJ01000001
229220
Verrucomicrobiota
CAT
Met
>WENV183722864
PDYJ01000001
8960
Verrucomicrobiota
CGA
Ser
>WENV183722869
PDYJ01000001
101463
Verrucomicrobiota
TAA
Leu
>WENV183722886
PDYJ01000001
157427
Verrucomicrobiota
GTC
Asp
>WENV183722898
PDYJ01000001
157427
Verrucomicrobiota
GTC
Asp
>WENV183722884
PDYJ01000001
293079
Verrucomicrobiota
CGC
Ala
>WENV183722903
PDYJ01000001
120352
Verrucomicrobiota
TAG
Leu
>WENV183722870
PDYJ01000001
292636
Verrucomicrobiota
>WENV183722865
PDYJ01000001
489412
Verrucomicrobiota
TCC
Gly
>WENV183722878
PDYJ01000001
298263
Verrucomicrobiota
TTC
Glu
>WENV183722895
PDYJ01000001
298263
Verrucomicrobiota
TTC
Glu
>WENV183722893
PDYJ01000001
293069
Verrucomicrobiota
CTT
Lys
>WENV183722894
PDYJ01000001
293069
Verrucomicrobiota
CTT
Lys
>WENV183722868
PDYJ01000001
406336
Verrucomicrobiota
CCT
Arg
>WENV183722906
PDYJ01000001
406369
Verrucomicrobiota
CCG
Arg
>WENV183722907
PDYJ01000001
405940
Verrucomicrobiota
GGT
Thr
>WENV183722874
PDYJ01000001
406044
Verrucomicrobiota
CTG
Gln
>WENV183722904
PDYJ01000001
187556
Verrucomicrobiota
GGG
Pro
>WENV183722879
PDYJ01000001
406037
Verrucomicrobiota
GTG
His
>WENV183722875
PDYJ01000001
406360
Verrucomicrobiota
GAC
Val
>WENV183722889
PDYJ01000001
187548
Verrucomicrobiota
TCT
Arg
>WENV183722892
PDYJ01000001
406040
Verrucomicrobiota
CGT
Thr
>WENV183722876
PDYJ01000001
57652
Verrucomicrobiota
TGA
Ser
>WENV183722900
PDYJ01000001
406039
Verrucomicrobiota
CAC
Val
>WENV183722861
PDYJ01000001
75458
Verrucomicrobiota
CAG
Leu
>WENV183722873
PDYJ01000001
406368
Verrucomicrobiota
TTG
Gln
>WENV183722887
PDYJ01000001
21159
Verrucomicrobiota
GGA
Ser
>WENV183722910
PDYJ01000001
101461
Verrucomicrobiota
GTA
Tyr
>WENV183722888
PDYJ01000001
293095
Verrucomicrobiota
TTT
Lys
>WENV183722885
PDYJ01000001
187561
Verrucomicrobiota
CGG
Pro
>WENV183722896
PDYJ01000001
406342
Verrucomicrobiota
CAT
Met
>WENV183722909
PDYJ01000001
406351
Verrucomicrobiota
GTT
Asn
>WENV183722899
PDYJ01000001
303305
Verrucomicrobiota
GGC
Ala
>WENV183722897
PDYJ01000001
406346
Verrucomicrobiota
TAC
Val
>WENV183722871
PDYJ01000001
8938
Verrucomicrobiota
GCT
Ser
>WENV183722867
PDYJ01000001
186928
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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