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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV077172
AAFX01001127
273452
Alphaproteobacteria
CAT
Met
>WENV077771
AAFX01104366
460769
Alphaproteobacteria
CGT
Thr
>WENV077377
AAFX01028663
454180
Alphaproteobacteria
CGT
Thr
>WENV077625
AAFX01074907
454180
Alphaproteobacteria
CGT
Thr
>WENV077855
AAFX01114736
453948
Alphaproteobacteria
GGC
Ala
>WENV077614
AAFX01071958
273450
Alphaproteobacteria
TCT
Arg
>WENV077629
AAFX01075504
270775
Alphaproteobacteria
ACG
Arg
>WENV077679
AAFX01086580
658382
Alphaproteobacteria
GCC
Gly
>WENV077208
AAFX01006583
661074
Alphaproteobacteria
GCC
Gly
>WENV077930
AAFX01127855
660487
Alphaproteobacteria
GCC
Gly
>WENV077665
AAFX01083333
454489
Alphaproteobacteria
CGC
Ala
>WENV077668
AAFX01084042
686623
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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