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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170002587
AGTN01077116
273592
Bacteroidota
TGT
Thr
>WENV170002987
AGTN01185745
780177
Bacteroidota
CCA
Trp
>WENV170002432
AGTN01028479
30311
Bacteroidota
GGA
Ser
>WENV170002683
AGTN01100579
454955
Bacteroidota
TGT
Thr
>WENV170002504
AGTN01052447
112241
Bacteroidota
CAA
Leu
>WENV170004149
AGTN01577971
660213
Bacteroidota
TTC
Glu
>WENV170002637
AGTN01089895
283437
Bacteroidota
TGT
Thr
>WENV170003831
AGTN01465688
454129
Bacteroidota
TTT
Lys
>WENV170004626
AGTN01741215
240996
Bacteroidota
TGG
Pro
>WENV170002644
AGTN01091393
451431
Bacteroidota
CCA
Trp
>WENV170003479
AGTN01351155
273589
Bacteroidota
CAT
Met
>WENV170002958
AGTN01179745
274353
Bacteroidota
CAT
Met
>WENV170002483
AGTN01045659
454407
Bacteroidota
TCC
Gly
>WENV170003712
AGTN01423589
241213
Bacteroidota
TGG
Pro
>WENV170003537
AGTN01369743
180844
Bacteroidota
TAG
Leu
>WENV170004440
AGTN01678152
180844
Bacteroidota
TAG
Leu
>WENV170003317
AGTN01295560
456222
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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