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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170005020
AJWZ01010137
451336
Bacillota
GAA
Phe
>WENV170005078
AJWZ01012024
270436
Bacillota
GTG
His
>WENV170005076
AJWZ01012024
779389
Bacillota
TCC
Gly
>WENV170005077
AJWZ01012024
275792
Bacillota
TCT
Arg
>WENV170004930
AJWZ01001395
452811
Bacillota
TGC
Ala
>WENV170004955
AJWZ01003064
287917
Bacillota
GAT
Ile
>WENV170004995
AJWZ01007090
270421
Bacillota
GTC
Asp
>WENV170005010
AJWZ01008400
270452
Bacillota
GAT
Ile
>WENV170005008
AJWZ01007983
451375
Bacillota
GGC
Ala
>WENV170004978
AJWZ01005539
270447
Bacillota
GTT
Asn
>WENV170004977
AJWZ01005539
653369
Bacillota
CTC
Glu
>WENV170004924
AJWZ01001164
451376
Bacillota
GCC
Gly
>WENV170004949
AJWZ01002746
451376
Bacillota
GCC
Gly
>WENV170005021
AJWZ01010137
451376
Bacillota
GCC
Gly
>WENV170005011
AJWZ01008464
653373
Bacillota
TTC
Glu
>WENV170004984
AJWZ01005951
457194
Bacillota
TAC
Val
>WENV170004952
AJWZ01002903
451334
Bacillota
TGT
Thr
>WENV170005059
AJWZ01011612
454988
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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