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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170014352
AYRE01005787
12367
Gammaproteobacteria
GCT
Ser
>WENV170014339
AYRE01002927
180464
Gammaproteobacteria
GAG
Leu
>WENV170014356
AYRE01006045
180705
Gammaproteobacteria
GTA
Tyr
>WENV170014349
AYRE01005605
273695
Gammaproteobacteria
GGT
Thr
>WENV170014340
AYRE01003275
273703
Gammaproteobacteria
TCT
Arg
>WENV170014333
AYRE01001013
273698
Gammaproteobacteria
CCG
Arg
>WENV170014326
AYRE01000483
30510
Gammaproteobacteria
GGA
Ser
>WENV170014351
AYRE01005779
451782
Gammaproteobacteria
GTG
His
>WENV170014358
AYRE01006497
270822
Gammaproteobacteria
CCA
Trp
>WENV170014362
AYRE01006790
279312
Gammaproteobacteria
GAT
Ile
>WENV170014353
AYRE01005787
298662
Gammaproteobacteria
ACG
Arg
>WENV170014328
AYRE01000639
454808
Gammaproteobacteria
CAT
Met
>WENV170014360
AYRE01006535
483476
Gammaproteobacteria
TGT
Thr
>WENV170014359
AYRE01006535
483474
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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