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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV082475
BAAV01011870
180100
Actinomycetota
GTA
Tyr
>WENV082306
BAAV01002444
451412
Actinomycetota
GTT
Asn
>WENV082627
BAAV01028229
451442
Actinomycetota
GGC
Ala
>WENV082579
BAAV01021161
228568
Actinomycetota
TAA
Leu
>WENV082474
BAAV01011870
271229
Actinomycetota
CAT
Met
>WENV082586
BAAV01022886
270411
Actinomycetota
ACG
Arg
>WENV082587
BAAV01022886
270411
Actinomycetota
ACG
Arg
>WENV082261
BAAV01000978
451413
Actinomycetota
CCT
Arg
>WENV082605
BAAV01024930
779447
Actinomycetota
GCA
Cys
>WENV082439
BAAV01010400
270415
Actinomycetota
TAT
Ile
>WENV082496
BAAV01013916
270403
Actinomycetota
TGT
Thr
>WENV082361
BAAV01004494
72674
Actinomycetota
CGA
Ser
>WENV082307
BAAV01002444
451432
Actinomycetota
GTT
Asn
>WENV082408
BAAV01007678
779392
Actinomycetota
CCC
Gly
>WENV082424
BAAV01009012
451402
Actinomycetota
CTC
Glu
>WENV082608
BAAV01025705
466731
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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