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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV082630
BAAV01028453
457039
Bacillota
GAA
Phe
>WENV082558
BAAV01017999
279369
Bacillota
CAT
Met
>WENV082211
BAAV01000442
451336
Bacillota
GAA
Phe
>WENV082519
BAAV01015145
451336
Bacillota
GAA
Phe
>WENV082686
BAAV01032787
270416
Bacillota
CAC
Val
>WENV082452
BAAV01011269
455828
Bacillota
TAC
Val
>WENV082321
BAAV01003058
653346
Bacillota
TTC
Glu
>WENV082706
BAAV01035395
467910
Bacillota
TGC
Ala
>WENV082294
BAAV01001993
464223
Bacillota
TTT
Lys
>WENV082477
BAAV01011894
477214
Bacillota
TGC
Ala
>WENV082693
BAAV01033910
779387
Bacillota
TTG
Gln
>WENV082305
BAAV01002358
465106
Bacillota
TGT
Thr
>WENV082696
BAAV01034253
270426
Bacillota
GAT
Ile
>WENV082553
BAAV01017548
780499
Bacillota
GCA
Cys
>WENV082690
BAAV01033287
780499
Bacillota
GCA
Cys
>WENV082592
BAAV01023053
451355
Bacillota
GAC
Val
>WENV082705
BAAV01035395
279224
Bacillota
GAT
Ile
>WENV082331
BAAV01003406
653367
Bacillota
CTC
Glu
>WENV082273
BAAV01001506
282469
Bacillota
GAC
Val
>WENV082279
BAAV01001709
463246
Bacillota
GTT
Asn
>WENV082374
BAAV01005123
73368
Bacillota
TGA
Ser
>WENV082446
BAAV01011088
661851
Bacillota
GCA
Cys
>WENV082379
BAAV01005517
270438
Bacillota
TCT
Arg
>WENV082297
BAAV01002148
451352
Bacillota
GGT
Thr
>WENV082429
BAAV01009598
451352
Bacillota
GGT
Thr
>WENV082460
BAAV01011331
451352
Bacillota
GGT
Thr
>WENV082637
BAAV01028655
451398
Bacillota
TGC
Ala
>WENV082293
BAAV01001993
463801
Bacillota
TTC
Glu
>WENV082560
BAAV01017999
460792
Bacillota
CAT
Met
>WENV082430
BAAV01009598
284668
Bacillota
GTC
Asp
>WENV082459
BAAV01011331
284668
Bacillota
GTC
Asp
>WENV082518
BAAV01015145
284668
Bacillota
GTC
Asp
>WENV082407
BAAV01007638
463802
Bacillota
GGC
Ala
>WENV082376
BAAV01005300
31194
Bacillota
GCT
Ser
>WENV082322
BAAV01003098
282467
Bacillota
CCT
Arg
>WENV082292
BAAV01001993
461007
Bacillota
TAC
Val
>WENV082290
BAAV01001961
659703
Bacillota
TTG
Gln
>WENV082234
BAAV01000771
451357
Bacillota
CTT
Lys
>WENV082286
BAAV01001880
451357
Bacillota
CTT
Lys
>WENV082603
BAAV01024675
451357
Bacillota
CTT
Lys
>WENV082624
BAAV01028036
451357
Bacillota
CTT
Lys
>WENV082320
BAAV01003058
270546
Bacillota
CAT
Met
>WENV082254
BAAV01000939
460809
Bacillota
CTT
Lys
>WENV082571
BAAV01019127
466773
Bacillota
GGC
Ala
>WENV082181
BAAV01000058
451375
Bacillota
GGC
Ala
>WENV082642
BAAV01029013
451375
Bacillota
GGC
Ala
>WENV082310
BAAV01002759
282466
Bacillota
ACG
Arg
>WENV082344
BAAV01004090
461574
Bacillota
TGT
Thr
>WENV082287
BAAV01001880
653369
Bacillota
CTC
Glu
>WENV082625
BAAV01028036
653369
Bacillota
CTC
Glu
>WENV082197
BAAV01000221
270399
Bacillota
GAT
Ile
>WENV082218
BAAV01000571
270399
Bacillota
GAT
Ile
>WENV082462
BAAV01011386
270399
Bacillota
GAT
Ile
>WENV082565
BAAV01018138
270399
Bacillota
GAT
Ile
>WENV082332
BAAV01003447
451376
Bacillota
GCC
Gly
>WENV082445
BAAV01011088
451376
Bacillota
GCC
Gly
>WENV082520
BAAV01015145
451376
Bacillota
GCC
Gly
>WENV082441
BAAV01010401
653373
Bacillota
TTC
Glu
>WENV082219
BAAV01000571
451344
Bacillota
TGC
Ala
>WENV082269
BAAV01001391
461022
Bacillota
TGC
Ala
>WENV082283
BAAV01001815
461022
Bacillota
TGC
Ala
>WENV082262
BAAV01000992
451334
Bacillota
TGT
Thr
>WENV082275
BAAV01001600
270405
Bacillota
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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