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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170134083
CENU01076970
733646
Alphaproteobacteria
GAC
Val
>WENV170133543
CENU01031820
311588
Alphaproteobacteria
CAT
Met
>WENV170133854
CENU01058026
311588
Alphaproteobacteria
CAT
Met
>WENV170134530
CENU01116536
311588
Alphaproteobacteria
CAT
Met
>WENV170135281
CENU01192635
311588
Alphaproteobacteria
CAT
Met
>WENV170135180
CENU01183808
737487
Alphaproteobacteria
GAA
Phe
>WENV170133142
CENU01006925
206234
Alphaproteobacteria
TAG
Leu
>WENV170133706
CENU01045091
510370
Alphaproteobacteria
TTT
Lys
>WENV170133212
CENU01012154
313362
Alphaproteobacteria
CCG
Arg
>WENV170133665
CENU01041043
313362
Alphaproteobacteria
CCG
Arg
>WENV170134752
CENU01138426
313362
Alphaproteobacteria
CCG
Arg
>WENV170134344
CENU01097463
306664
Alphaproteobacteria
TGG
Pro
>WENV170134153
CENU01082914
315263
Alphaproteobacteria
ACG
Arg
>WENV170135646
CENU01266554
509341
Alphaproteobacteria
TGC
Ala
>WENV170133056
CENU01001227
734068
Alphaproteobacteria
GTT
Asn
>WENV170134623
CENU01127140
735797
Alphaproteobacteria
GAC
Val
>WENV170133555
CENU01032664
310789
Alphaproteobacteria
CAT
Met
>WENV170135274
CENU01191915
732495
Alphaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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