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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170134371
CENU01099855
273758
Gammaproteobacteria
GAC
Val
>WENV170134856
CENU01150225
275457
Gammaproteobacteria
ACG
Arg
>WENV170135550
CENU01204967
275457
Gammaproteobacteria
ACG
Arg
>WENV170134675
CENU01131818
30610
Gammaproteobacteria
TGA
Ser
>WENV170133930
CENU01062766
46027
Gammaproteobacteria
GGA
Ser
>WENV170134599
CENU01124841
270982
Gammaproteobacteria
GAT
Ile
>WENV170133955
CENU01065259
272023
Gammaproteobacteria
GAT
Ile
>WENV170133080
CENU01002792
467367
Gammaproteobacteria
GGT
Thr
>WENV170135777
CENU01338055
30865
Gammaproteobacteria
GCT
Ser
>WENV170134476
CENU01110969
463212
Gammaproteobacteria
GTG
His
>WENV170133535
CENU01031537
454856
Gammaproteobacteria
GCC
Gly
>WENV170134699
CENU01133763
274776
Gammaproteobacteria
GGG
Pro
>WENV170134275
CENU01092745
273756
Gammaproteobacteria
TGG
Pro
>WENV170134478
CENU01111167
460378
Gammaproteobacteria
TAC
Val
>WENV170133829
CENU01055119
780765
Gammaproteobacteria
CCC
Gly
>WENV170135910
CENU01388465
458352
Gammaproteobacteria
TTG
Gln
>WENV170135056
CENU01170594
180482
Gammaproteobacteria
GAG
Leu
>WENV170133993
CENU01069076
47153
Gammaproteobacteria
GGA
Ser
>WENV170134537
CENU01117609
454864
Gammaproteobacteria
TAC
Val
>WENV170135231
CENU01188137
781121
Gammaproteobacteria
GCA
Cys
>WENV170133133
CENU01006504
459731
Gammaproteobacteria
GGT
Thr
>WENV170134451
CENU01108724
459731
Gammaproteobacteria
GGT
Thr
>WENV170134276
CENU01092745
273757
Gammaproteobacteria
TCT
Arg
>WENV170135792
CENU01343145
276972
Gammaproteobacteria
CCA
Trp
>WENV170134188
CENU01085616
454397
Gammaproteobacteria
TGT
Thr
>WENV170135027
CENU01167237
454397
Gammaproteobacteria
TGT
Thr
>WENV170134535
CENU01117609
454091
Gammaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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