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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170136426
CENV01032275
653537
Alphaproteobacteria
GGT
Thr
>WENV170136697
CENV01062766
46086
Alphaproteobacteria
CGA
Ser
>WENV170136695
CENV01062340
273905
Alphaproteobacteria
TGG
Pro
>WENV170136658
CENV01058390
273452
Alphaproteobacteria
CAT
Met
>WENV170136150
CENV01006087
182272
Alphaproteobacteria
CAA
Leu
>WENV170136344
CENV01024762
460881
Alphaproteobacteria
CCA
Trp
>WENV170136174
CENV01008971
275671
Alphaproteobacteria
ACG
Arg
>WENV170136139
CENV01005068
454510
Alphaproteobacteria
CGT
Thr
>WENV170136807
CENV01078639
654960
Alphaproteobacteria
CTC
Glu
>WENV170136970
CENV01125745
218119
Alphaproteobacteria
>WENV170136761
CENV01072226
479115
Alphaproteobacteria
GTT
Asn
>WENV170136534
CENV01045875
281747
Alphaproteobacteria
CCT
Arg
>WENV170136192
CENV01010630
277664
Alphaproteobacteria
GTC
Asp
>WENV170136879
CENV01088103
454623
Alphaproteobacteria
TAC
Val
>WENV170136778
CENV01073937
299109
Alphaproteobacteria
GAC
Val
>WENV170136330
CENV01023201
274224
Alphaproteobacteria
CAT
Met
>WENV170136294
CENV01020165
655359
Alphaproteobacteria
GAC
Val
>WENV170136551
CENV01047713
180507
Alphaproteobacteria
TAG
Leu
>WENV170136728
CENV01066214
479047
Alphaproteobacteria
TTT
Lys
>WENV170136481
CENV01040274
451742
Alphaproteobacteria
GGC
Ala
>WENV170136746
CENV01069325
451742
Alphaproteobacteria
GGC
Ala
>WENV170136753
CENV01070848
117253
Alphaproteobacteria
GAG
Leu
>WENV170136825
CENV01080245
117253
Alphaproteobacteria
GAG
Leu
>WENV170136363
CENV01026698
655363
Alphaproteobacteria
GGT
Thr
>WENV170136568
CENV01049309
655363
Alphaproteobacteria
GGT
Thr
>WENV170136659
CENV01058391
273451
Alphaproteobacteria
GTG
His
>WENV170136978
CENV01127562
779636
Alphaproteobacteria
CTG
Gln
>WENV170136838
CENV01083124
655392
Alphaproteobacteria
GAC
Val
>WENV170136105
CENV01001812
274138
Alphaproteobacteria
CAT
Met
>WENV170136854
CENV01085268
653931
Alphaproteobacteria
GTT
Asn
>WENV170136820
CENV01079681
454512
Alphaproteobacteria
CCA
Trp
>WENV170136409
CENV01030784
455360
Alphaproteobacteria
CGC
Ala
>WENV170136202
CENV01011342
455360
Alphaproteobacteria
CGC
Ala
>WENV170136306
CENV01020993
32136
Alphaproteobacteria
GGA
Ser
>WENV170136517
CENV01044107
655361
Alphaproteobacteria
GCC
Gly
>WENV170136812
CENV01079008
294262
Alphaproteobacteria
CCT
Arg
>WENV170136992
CENV01130553
452755
Alphaproteobacteria
TAC
Val
>WENV170136090
CENV01000529
454914
Alphaproteobacteria
TTT
Lys
>WENV170136147
CENV01005920
112839
Alphaproteobacteria
CAG
Leu
>WENV170136364
CENV01026698
780283
Alphaproteobacteria
TCC
Gly
>WENV170136138
CENV01005068
780039
Alphaproteobacteria
GCA
Cys
>WENV170136665
CENV01058828
780039
Alphaproteobacteria
GCA
Cys
>WENV170136278
CENV01019274
274130
Alphaproteobacteria
CGG
Pro
>WENV170136876
CENV01087687
275927
Alphaproteobacteria
CCG
Arg
>WENV170136549
CENV01047563
656202
Alphaproteobacteria
TTG
Gln
>WENV170136342
CENV01024592
654915
Alphaproteobacteria
GCC
Gly
>WENV170136564
CENV01049141
301299
Alphaproteobacteria
CCG
Arg
>WENV170136550
CENV01047566
455028
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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