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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170162490
CEOM01035802
273835
Bacteroidota
GTT
Asn
>WENV170162167
CEOM01007748
32554
Bacteroidota
GGA
Ser
>WENV170162454
CEOM01032255
271717
Bacteroidota
GTC
Asp
>WENV170163032
CEOM01087670
271717
Bacteroidota
GTC
Asp
>WENV170163587
CEOM01151139
271717
Bacteroidota
GTC
Asp
>WENV170163212
CEOM01108158
456729
Bacteroidota
GAA
Phe
>WENV170164223
CEOM01206705
456729
Bacteroidota
GAA
Phe
>WENV170164258
CEOM01207478
456729
Bacteroidota
GAA
Phe
>WENV170162138
CEOM01005705
456414
Bacteroidota
GAA
Phe
>WENV170162259
CEOM01014594
456414
Bacteroidota
GAA
Phe
>WENV170162423
CEOM01029189
456414
Bacteroidota
GAA
Phe
>WENV170162799
CEOM01065291
456414
Bacteroidota
GAA
Phe
>WENV170162925
CEOM01076632
456414
Bacteroidota
GAA
Phe
>WENV170163221
CEOM01109365
241614
Bacteroidota
GAC
Val
>WENV170163375
CEOM01125536
241614
Bacteroidota
GAC
Val
>WENV170164060
CEOM01197515
241614
Bacteroidota
GAC
Val
>WENV170163242
CEOM01111601
452741
Bacteroidota
TCC
Gly
>WENV170162344
CEOM01022103
452487
Bacteroidota
CCA
Trp
>WENV170162449
CEOM01031547
452487
Bacteroidota
CCA
Trp
>WENV170162575
CEOM01043030
452487
Bacteroidota
CCA
Trp
>WENV170162649
CEOM01049032
452487
Bacteroidota
CCA
Trp
>WENV170164018
CEOM01195606
452487
Bacteroidota
CCA
Trp
>WENV170162328
CEOM01020397
272122
Bacteroidota
GTC
Asp
>WENV170162425
CEOM01029331
272122
Bacteroidota
GTC
Asp
>WENV170163026
CEOM01086889
272122
Bacteroidota
GTC
Asp
>WENV170163219
CEOM01108962
272122
Bacteroidota
GTC
Asp
>WENV170164098
CEOM01201236
272122
Bacteroidota
GTC
Asp
>WENV170162433
CEOM01029890
655825
Bacteroidota
TTC
Glu
>WENV170162502
CEOM01036385
655825
Bacteroidota
TTC
Glu
>WENV170162776
CEOM01063423
655825
Bacteroidota
TTC
Glu
>WENV170163090
CEOM01093608
655825
Bacteroidota
TTC
Glu
>WENV170163621
CEOM01156484
655825
Bacteroidota
TTC
Glu
>WENV170162836
CEOM01068295
31447
Bacteroidota
GGA
Ser
>WENV170164025
CEOM01195729
31447
Bacteroidota
GGA
Ser
>WENV170162680
CEOM01051720
459901
Bacteroidota
CCA
Trp
>WENV170162600
CEOM01044907
241654
Bacteroidota
TAC
Val
>WENV170163194
CEOM01105535
460269
Bacteroidota
CAT
Met
>WENV170162310
CEOM01019229
296838
Bacteroidota
GAT
Ile
>WENV170162351
CEOM01022684
278725
Bacteroidota
GTT
Asn
>WENV170162369
CEOM01024818
278725
Bacteroidota
GTT
Asn
>WENV170162445
CEOM01031181
278725
Bacteroidota
GTT
Asn
>WENV170162872
CEOM01071311
278725
Bacteroidota
GTT
Asn
>WENV170163143
CEOM01099801
278725
Bacteroidota
GTT
Asn
>WENV170163556
CEOM01147748
278725
Bacteroidota
GTT
Asn
>WENV170162453
CEOM01032096
277953
Bacteroidota
GTC
Asp
>WENV170163347
CEOM01122504
277953
Bacteroidota
GTC
Asp
>WENV170162789
CEOM01064710
86958
Bacteroidota
TGA
Ser
>WENV170162504
CEOM01036541
240683
Bacteroidota
TGG
Pro
>WENV170162510
CEOM01036748
240683
Bacteroidota
TGG
Pro
>WENV170162612
CEOM01046275
240683
Bacteroidota
TGG
Pro
>WENV170162891
CEOM01074038
240683
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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