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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170164040
CEOM01196203
455176
Cyanobacteriota
GTG
His
>WENV170162457
CEOM01032642
466527
Cyanobacteriota
GTG
His
>WENV170162846
CEOM01069305
275732
Cyanobacteriota
GGG
Pro
>WENV170163321
CEOM01120542
661714
Cyanobacteriota
GAC
Val
>WENV170162455
CEOM01032303
274043
Cyanobacteriota
CCG
Arg
>WENV170164260
CEOM01207526
478836
Cyanobacteriota
CAT
Met
>WENV170162640
CEOM01048379
112853
Cyanobacteriota
CAG
Leu
>WENV170163310
CEOM01119365
274052
Cyanobacteriota
CAT
Met
>WENV170163920
CEOM01187996
274045
Cyanobacteriota
GTC
Asp
>WENV170163572
CEOM01149442
458795
Cyanobacteriota
GGC
Ala
>WENV170163620
CEOM01156471
458795
Cyanobacteriota
GGC
Ala
>WENV170162513
CEOM01036817
455175
Cyanobacteriota
CCA
Trp
>WENV170162582
CEOM01043248
655305
Cyanobacteriota
GAC
Val
>WENV170162749
CEOM01060319
284371
Cyanobacteriota
CGG
Pro
>WENV170162714
CEOM01056278
283475
Cyanobacteriota
ACG
Arg
>WENV170162514
CEOM01036817
271967
Cyanobacteriota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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