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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170164322
CEOM01251483
779604
Gammaproteobacteria
GCA
Cys
>WENV170162701
CEOM01054635
274150
Gammaproteobacteria
CAT
Met
>WENV170164150
CEOM01203763
274150
Gammaproteobacteria
CAT
Met
>WENV170163657
CEOM01160498
656944
Gammaproteobacteria
CCT
Arg
>WENV170164284
CEOM01229499
653834
Gammaproteobacteria
TCC
Gly
>WENV170163420
CEOM01130098
456247
Gammaproteobacteria
CCA
Trp
>WENV170162278
CEOM01016613
458351
Gammaproteobacteria
TTG
Gln
>WENV170162293
CEOM01017509
276971
Gammaproteobacteria
ACG
Arg
>WENV170164496
CEOM01360033
780765
Gammaproteobacteria
CCC
Gly
>WENV170162107
CEOM01003749
113737
Gammaproteobacteria
CAA
Leu
>WENV170162418
CEOM01028958
113737
Gammaproteobacteria
CAA
Leu
>WENV170162179
CEOM01009035
781121
Gammaproteobacteria
GCA
Cys
>WENV170162618
CEOM01046782
459731
Gammaproteobacteria
GGT
Thr
>WENV170162913
CEOM01075541
459731
Gammaproteobacteria
GGT
Thr
>WENV170164285
CEOM01229499
452405
Gammaproteobacteria
GGT
Thr
>WENV170162923
CEOM01076538
454397
Gammaproteobacteria
TGT
Thr
>WENV170163540
CEOM01145403
276970
Gammaproteobacteria
CCG
Arg
>WENV170163820
CEOM01178079
276970
Gammaproteobacteria
CCG
Arg
>WENV170163478
CEOM01135801
30792
Gammaproteobacteria
GGA
Ser
>WENV170164152
CEOM01203860
274093
Gammaproteobacteria
GTC
Asp
>WENV170162702
CEOM01054662
274093
Gammaproteobacteria
GTC
Asp
>WENV170163970
CEOM01192718
274093
Gammaproteobacteria
GTC
Asp
>WENV170162775
CEOM01063394
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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