This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170173346
CEOQ01201217
452884
Alphaproteobacteria
CCA
Trp
>WENV170171539
CEOQ01061305
455289
Alphaproteobacteria
TTT
Lys
>WENV170173050
CEOQ01174416
455289
Alphaproteobacteria
TTT
Lys
>WENV170171764
CEOQ01073823
30553
Alphaproteobacteria
GGA
Ser
>WENV170171828
CEOQ01076895
780331
Alphaproteobacteria
TCC
Gly
>WENV170173024
CEOQ01171528
780331
Alphaproteobacteria
TCC
Gly
>WENV170170896
CEOQ01029353
281026
Alphaproteobacteria
CAT
Met
>WENV170170455
CEOQ01003759
274224
Alphaproteobacteria
CAT
Met
>WENV170173092
CEOQ01178205
274224
Alphaproteobacteria
CAT
Met
>WENV170171186
CEOQ01043348
653532
Alphaproteobacteria
GTT
Asn
>WENV170171829
CEOQ01076896
655363
Alphaproteobacteria
GGT
Thr
>WENV170170440
CEOQ01003423
274144
Alphaproteobacteria
GTG
His
>WENV170170748
CEOQ01021828
274144
Alphaproteobacteria
GTG
His
>WENV170170454
CEOQ01003759
273451
Alphaproteobacteria
GTG
His
>WENV170170648
CEOQ01014476
455172
Alphaproteobacteria
GGC
Ala
>WENV170173908
CEOQ01253464
455172
Alphaproteobacteria
GGC
Ala
>WENV170175091
CEOQ01454446
273450
Alphaproteobacteria
TCT
Arg
>WENV170172848
CEOQ01154233
47329
Alphaproteobacteria
TGA
Ser
>WENV170174910
CEOQ01370494
274138
Alphaproteobacteria
CAT
Met
>WENV170174417
CEOQ01289730
270799
Alphaproteobacteria
CAT
Met
>WENV170173262
CEOQ01193434
46044
Alphaproteobacteria
TGA
Ser
>WENV170170657
CEOQ01014964
455360
Alphaproteobacteria
CGC
Ala
>WENV170170899
CEOQ01029361
455360
Alphaproteobacteria
CGC
Ala
>WENV170171075
CEOQ01038781
655361
Alphaproteobacteria
GCC
Gly
>WENV170171345
CEOQ01050719
780346
Alphaproteobacteria
CTG
Gln
>WENV170174198
CEOQ01275275
454504
Alphaproteobacteria
CAT
Met
>WENV170174186
CEOQ01274392
20317
Alphaproteobacteria
GCT
Ser
>WENV170171537
CEOQ01061299
31090
Alphaproteobacteria
GGA
Ser
>WENV170170452
CEOQ01003758
281029
Alphaproteobacteria
GGG
Pro
>WENV170171346
CEOQ01050719
780039
Alphaproteobacteria
GCA
Cys
>WENV170173199
CEOQ01188514
780039
Alphaproteobacteria
GCA
Cys
>WENV170170901
CEOQ01029362
454433
Alphaproteobacteria
TGT
Thr
>WENV170172556
CEOQ01128906
779596
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK