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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170178025
CEOV01002772
206184
Cyanobacteriota
TAG
Leu
>WENV170178184
CEOV01017204
513840
Cyanobacteriota
GGC
Ala
>WENV170179493
CEOV01231457
53645
Cyanobacteriota
CGA
Ser
>WENV170178323
CEOV01030954
308102
Cyanobacteriota
GTC
Asp
>WENV170178763
CEOV01078863
733930
Cyanobacteriota
GAC
Val
>WENV170178314
CEOV01030369
737695
Cyanobacteriota
TGT
Thr
>WENV170178258
CEOV01024941
513842
Cyanobacteriota
CGC
Ala
>WENV170179342
CEOV01169262
54080
Cyanobacteriota
CGA
Ser
>WENV170178687
CEOV01070897
205244
Cyanobacteriota
TAG
Leu
>WENV170178383
CEOV01036365
510626
Cyanobacteriota
GTG
His
>WENV170178416
CEOV01040481
752243
Cyanobacteriota
TGT
Thr
>WENV170178455
CEOV01045062
311189
Cyanobacteriota
CAT
Met
>WENV170179005
CEOV01109576
311189
Cyanobacteriota
CAT
Met
>WENV170178784
CEOV01081012
311056
Cyanobacteriota
CGG
Pro
>WENV170178118
CEOV01011060
872522
Cyanobacteriota
TCC
Gly
>WENV170178828
CEOV01086515
311034
Cyanobacteriota
CAT
Met
>WENV170178174
CEOV01016613
735602
Cyanobacteriota
GAC
Val
>WENV170178117
CEOV01010920
23684
Cyanobacteriota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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