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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170178383
CEOV01036365
455176
Cyanobacteriota
GTG
His
>WENV170178117
CEOV01010920
19914
Cyanobacteriota
GCT
Ser
>WENV170178184
CEOV01017204
453784
Cyanobacteriota
GGC
Ala
>WENV170178455
CEOV01045062
274052
Cyanobacteriota
CAT
Met
>WENV170179005
CEOV01109576
274052
Cyanobacteriota
CAT
Met
>WENV170178687
CEOV01070897
181165
Cyanobacteriota
TAG
Leu
>WENV170178118
CEOV01011060
779735
Cyanobacteriota
TCC
Gly
>WENV170178763
CEOV01078863
654266
Cyanobacteriota
GAC
Val
>WENV170178828
CEOV01086515
272148
Cyanobacteriota
CAT
Met
>WENV170179493
CEOV01231457
49462
Cyanobacteriota
CGA
Ser
>WENV170178174
CEOV01016613
655305
Cyanobacteriota
GAC
Val
>WENV170178258
CEOV01024941
455178
Cyanobacteriota
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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