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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170235985
CEQL01139592
457159
Alphaproteobacteria
CGC
Ala
>WENV170235837
CEQL01127700
273448
Alphaproteobacteria
CGG
Pro
>WENV170236324
CEQL01228949
452565
Alphaproteobacteria
GAA
Phe
>WENV170236250
CEQL01183261
273155
Alphaproteobacteria
GTG
His
>WENV170236528
CEQL01327792
654960
Alphaproteobacteria
CTC
Glu
>WENV170235272
CEQL01062530
282775
Alphaproteobacteria
TCT
Arg
>WENV170235362
CEQL01072909
451742
Alphaproteobacteria
GGC
Ala
>WENV170236401
CEQL01280851
457162
Alphaproteobacteria
TTT
Lys
>WENV170235682
CEQL01109183
180320
Alphaproteobacteria
TAG
Leu
>WENV170235398
CEQL01077691
653931
Alphaproteobacteria
GTT
Asn
>WENV170236351
CEQL01247342
452755
Alphaproteobacteria
TAC
Val
>WENV170236010
CEQL01142006
275927
Alphaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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