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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170237220
CEQM01039516
270982
Gammaproteobacteria
GAT
Ile
>WENV170236956
CEQM01021599
272023
Gammaproteobacteria
GAT
Ile
>WENV170236621
CEQM01000693
276974
Gammaproteobacteria
GGG
Pro
>WENV170237190
CEQM01037409
276974
Gammaproteobacteria
GGG
Pro
>WENV170237433
CEQM01054707
276974
Gammaproteobacteria
GGG
Pro
>WENV170236794
CEQM01010809
276973
Gammaproteobacteria
GAC
Val
>WENV170237676
CEQM01073842
271287
Gammaproteobacteria
CAT
Met
>WENV170238595
CEQM01184356
780765
Gammaproteobacteria
CCC
Gly
>WENV170237248
CEQM01041323
456709
Gammaproteobacteria
TGC
Ala
>WENV170237135
CEQM01032559
459731
Gammaproteobacteria
GGT
Thr
>WENV170237605
CEQM01066432
113485
Gammaproteobacteria
CAA
Leu
>WENV170237560
CEQM01063321
454397
Gammaproteobacteria
TGT
Thr
>WENV170237241
CEQM01041081
276970
Gammaproteobacteria
CCG
Arg
>WENV170237930
CEQM01098830
276970
Gammaproteobacteria
CCG
Arg
>WENV170236957
CEQM01021599
466186
Gammaproteobacteria
TGC
Ala
>WENV170237442
CEQM01055037
274093
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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