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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170271677
CERJ01076645
273835
Bacteroidota
GTT
Asn
>WENV170271392
CERJ01010537
653934
Bacteroidota
TTC
Glu
>WENV170271600
CERJ01063989
281771
Bacteroidota
GGC
Ala
>WENV170271649
CERJ01073679
241614
Bacteroidota
GAC
Val
>WENV170271648
CERJ01073679
241622
Bacteroidota
TAC
Val
>WENV170271454
CERJ01017032
452487
Bacteroidota
CCA
Trp
>WENV170271449
CERJ01016878
285374
Bacteroidota
GTC
Asp
>WENV170271478
CERJ01020938
464575
Bacteroidota
GCC
Gly
>WENV170271432
CERJ01015188
452277
Bacteroidota
CAT
Met
>WENV170271391
CERJ01010038
452740
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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