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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170298931
CESG01001162
655365
Alphaproteobacteria
TTC
Glu
>WENV170298932
CESG01001162
655365
Alphaproteobacteria
TTC
Glu
>WENV170299381
CESG01029848
455289
Alphaproteobacteria
TTT
Lys
>WENV170299247
CESG01020873
780331
Alphaproteobacteria
TCC
Gly
>WENV170299190
CESG01017461
274224
Alphaproteobacteria
CAT
Met
>WENV170299384
CESG01029849
19999
Alphaproteobacteria
GCT
Ser
>WENV170299246
CESG01020873
655363
Alphaproteobacteria
GGT
Thr
>WENV170299191
CESG01017462
274144
Alphaproteobacteria
GTG
His
>WENV170299447
CESG01034614
455172
Alphaproteobacteria
GGC
Ala
>WENV170299208
CESG01018463
273450
Alphaproteobacteria
TCT
Arg
>WENV170299508
CESG01039371
274138
Alphaproteobacteria
CAT
Met
>WENV170299086
CESG01011630
113418
Alphaproteobacteria
CAG
Leu
>WENV170299382
CESG01029848
454512
Alphaproteobacteria
CCA
Trp
>WENV170299577
CESG01042902
455360
Alphaproteobacteria
CGC
Ala
>WENV170299223
CESG01019116
655361
Alphaproteobacteria
GCC
Gly
>WENV170299383
CESG01029849
780346
Alphaproteobacteria
CTG
Gln
>WENV170299482
CESG01037655
112839
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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