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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170308367
CESL01021989
455289
Alphaproteobacteria
TTT
Lys
>WENV170308417
CESL01025663
455289
Alphaproteobacteria
TTT
Lys
>WENV170308970
CESL01079982
30553
Alphaproteobacteria
GGA
Ser
>WENV170308795
CESL01062141
780331
Alphaproteobacteria
TCC
Gly
>WENV170309485
CESL01146673
780331
Alphaproteobacteria
TCC
Gly
>WENV170309486
CESL01147021
277664
Alphaproteobacteria
GTC
Asp
>WENV170308500
CESL01033337
19999
Alphaproteobacteria
GCT
Ser
>WENV170308233
CESL01011946
655363
Alphaproteobacteria
GGT
Thr
>WENV170308404
CESL01024735
274144
Alphaproteobacteria
GTG
His
>WENV170309120
CESL01101345
274144
Alphaproteobacteria
GTG
His
>WENV170309554
CESL01153342
274144
Alphaproteobacteria
GTG
His
>WENV170308546
CESL01037234
455172
Alphaproteobacteria
GGC
Ala
>WENV170309603
CESL01156855
455172
Alphaproteobacteria
GGC
Ala
>WENV170308941
CESL01076649
273450
Alphaproteobacteria
TCT
Arg
>WENV170308678
CESL01049744
47329
Alphaproteobacteria
TGA
Ser
>WENV170308139
CESL01005147
274138
Alphaproteobacteria
CAT
Met
>WENV170308249
CESL01012728
454512
Alphaproteobacteria
CCA
Trp
>WENV170309547
CESL01153188
454512
Alphaproteobacteria
CCA
Trp
>WENV170308159
CESL01006625
455360
Alphaproteobacteria
CGC
Ala
>WENV170308286
CESL01015832
655361
Alphaproteobacteria
GCC
Gly
>WENV170308476
CESL01031035
655361
Alphaproteobacteria
GCC
Gly
>WENV170309148
CESL01104415
655361
Alphaproteobacteria
GCC
Gly
>WENV170308319
CESL01018636
780346
Alphaproteobacteria
CTG
Gln
>WENV170308849
CESL01066819
780346
Alphaproteobacteria
CTG
Gln
>WENV170308709
CESL01053011
281027
Alphaproteobacteria
CCT
Arg
>WENV170309391
CESL01136092
654791
Alphaproteobacteria
CTC
Glu
>WENV170308548
CESL01037495
654915
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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