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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170467795
CEVE01274038
278884
Bacteroidota
GGC
Ala
>WENV170466113
CEVE01022789
241614
Bacteroidota
GAC
Val
>WENV170466155
CEVE01025573
241614
Bacteroidota
GAC
Val
>WENV170466952
CEVE01100813
452487
Bacteroidota
CCA
Trp
>WENV170466486
CEVE01056418
272122
Bacteroidota
GTC
Asp
>WENV170467112
CEVE01117227
272122
Bacteroidota
GTC
Asp
>WENV170466639
CEVE01070219
779669
Bacteroidota
GCA
Cys
>WENV170467534
CEVE01149199
459901
Bacteroidota
CCA
Trp
>WENV170466112
CEVE01022769
452740
Bacteroidota
GAA
Phe
>WENV170467752
CEVE01260970
296387
Bacteroidota
CAT
Met
>WENV170465835
CEVE01004245
278725
Bacteroidota
GTT
Asn
>WENV170466835
CEVE01088135
278725
Bacteroidota
GTT
Asn
>WENV170466777
CEVE01082769
86958
Bacteroidota
TGA
Ser
>WENV170466804
CEVE01084865
272325
Bacteroidota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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