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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170473249
CEVH01017648
271464
Gammaproteobacteria
TGG
Pro
>WENV170473198
CEVH01013591
274150
Gammaproteobacteria
CAT
Met
>WENV170474223
CEVH01113376
274150
Gammaproteobacteria
CAT
Met
>WENV170474458
CEVH01141650
274150
Gammaproteobacteria
CAT
Met
>WENV170474555
CEVH01152154
274150
Gammaproteobacteria
CAT
Met
>WENV170473231
CEVH01016230
270982
Gammaproteobacteria
GAT
Ile
>WENV170473307
CEVH01022215
272023
Gammaproteobacteria
GAT
Ile
>WENV170474557
CEVH01152270
467367
Gammaproteobacteria
GGT
Thr
>WENV170473378
CEVH01028941
271388
Gammaproteobacteria
ACG
Arg
>WENV170473037
CEVH01000472
456510
Gammaproteobacteria
GGC
Ala
>WENV170473057
CEVH01001558
275549
Gammaproteobacteria
CAT
Met
>WENV170473199
CEVH01013609
453897
Gammaproteobacteria
TAC
Val
>WENV170474189
CEVH01109883
655194
Gammaproteobacteria
GGT
Thr
>WENV170474095
CEVH01100524
466186
Gammaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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