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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170524596
CEWH01032186
273835
Bacteroidota
GTT
Asn
>WENV170524970
CEWH01067760
273835
Bacteroidota
GTT
Asn
>WENV170525518
CEWH01133099
273835
Bacteroidota
GTT
Asn
>WENV170524459
CEWH01020333
456728
Bacteroidota
CAT
Met
>WENV170525581
CEWH01140193
271717
Bacteroidota
GTC
Asp
>WENV170524495
CEWH01023543
456414
Bacteroidota
GAA
Phe
>WENV170525040
CEWH01075985
456414
Bacteroidota
GAA
Phe
>WENV170525316
CEWH01107945
456414
Bacteroidota
GAA
Phe
>WENV170524951
CEWH01065243
241614
Bacteroidota
GAC
Val
>WENV170525214
CEWH01096694
241614
Bacteroidota
GAC
Val
>WENV170524445
CEWH01019069
452741
Bacteroidota
TCC
Gly
>WENV170524625
CEWH01034622
452741
Bacteroidota
TCC
Gly
>WENV170524378
CEWH01013308
452487
Bacteroidota
CCA
Trp
>WENV170525576
CEWH01139895
452487
Bacteroidota
CCA
Trp
>WENV170525613
CEWH01143221
452487
Bacteroidota
CCA
Trp
>WENV170524543
CEWH01027163
285374
Bacteroidota
GTC
Asp
>WENV170524449
CEWH01019483
272122
Bacteroidota
GTC
Asp
>WENV170524458
CEWH01020063
272122
Bacteroidota
GTC
Asp
>WENV170524814
CEWH01051312
272122
Bacteroidota
GTC
Asp
>WENV170524831
CEWH01053198
655825
Bacteroidota
TTC
Glu
>WENV170524972
CEWH01067975
655825
Bacteroidota
TTC
Glu
>WENV170525423
CEWH01123780
655825
Bacteroidota
TTC
Glu
>WENV170525697
CEWH01147610
31447
Bacteroidota
GGA
Ser
>WENV170524345
CEWH01010459
459901
Bacteroidota
CCA
Trp
>WENV170524824
CEWH01052575
280824
Bacteroidota
TGC
Ala
>WENV170525211
CEWH01095862
86958
Bacteroidota
TGA
Ser
>WENV170525688
CEWH01147417
240683
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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