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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170543233
CXQP01005722
451412
Actinomycetota
GTT
Asn
>WENV170543236
CXQP01005782
451412
Actinomycetota
GTT
Asn
>WENV170543226
CXQP01004458
451359
Actinomycetota
TTT
Lys
>WENV170543220
CXQP01004000
454262
Actinomycetota
GTT
Asn
>WENV170543231
CXQP01005515
273894
Actinomycetota
TAC
Val
>WENV170543230
CXQP01005133
451655
Actinomycetota
CCA
Trp
>WENV170543228
CXQP01005062
451474
Actinomycetota
CAC
Val
>WENV170543227
CXQP01005062
653394
Actinomycetota
GAC
Val
>WENV170543201
CXQP01003066
270704
Actinomycetota
ACG
Arg
>WENV170543205
CXQP01003322
228603
Actinomycetota
TAA
Leu
>WENV170543229
CXQP01005129
780405
Actinomycetota
CCC
Gly
>WENV170543202
CXQP01003096
451657
Actinomycetota
GGC
Ala
>WENV170543203
CXQP01003096
451657
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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