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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170570453
FLOH01000005
273835
Bacteroidota
GTT
Asn
>WENV170570911
FLOH01000037
273835
Bacteroidota
GTT
Asn
>WENV170570464
FLOH01000005
653934
Bacteroidota
TTC
Glu
>WENV170572184
FLOH01000584
653934
Bacteroidota
TTC
Glu
>WENV170571421
FLOH01000158
456414
Bacteroidota
GAA
Phe
>WENV170572656
FLOH01001126
113750
Bacteroidota
GCT
Ser
>WENV170570456
FLOH01000005
280682
Bacteroidota
TGT
Thr
>WENV170570873
FLOH01000032
280682
Bacteroidota
TGT
Thr
>WENV170571619
FLOH01000232
280682
Bacteroidota
TGT
Thr
>WENV170572142
FLOH01000558
657856
Bacteroidota
TTC
Glu
>WENV170570467
FLOH01000005
293748
Bacteroidota
TCT
Arg
>WENV170570912
FLOH01000037
460269
Bacteroidota
CAT
Met
>WENV170570450
FLOH01000005
275493
Bacteroidota
GTG
His
>WENV170573038
FLOH01004400
277953
Bacteroidota
GTC
Asp
>WENV170572691
FLOH01001165
277953
Bacteroidota
GTC
Asp
>WENV170570451
FLOH01000005
86958
Bacteroidota
TGA
Ser
>WENV170571618
FLOH01000232
240659
Bacteroidota
TGG
Pro
>WENV170572657
FLOH01001126
240659
Bacteroidota
TGG
Pro
>WENV170570463
FLOH01000005
240683
Bacteroidota
TGG
Pro
>WENV170570466
FLOH01000005
240683
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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