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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180011447
FLSK01003058
5736
Gammaproteobacteria
GCT
Ser
>WENV180012156
FLSK01219166
5774
Gammaproteobacteria
>WENV180012253
FLSK01299866
5774
Gammaproteobacteria
>WENV180011441
FLSK01003053
46905
Gammaproteobacteria
GGA
Ser
>WENV180011476
FLSK01003113
112377
Gammaproteobacteria
TAA
Leu
>WENV180011538
FLSK01003714
112377
Gammaproteobacteria
TAA
Leu
>WENV180011574
FLSK01005655
112377
Gammaproteobacteria
TAA
Leu
>WENV180011557
FLSK01004452
154084
Gammaproteobacteria
CAA
Leu
>WENV180011743
FLSK01036564
154084
Gammaproteobacteria
CAA
Leu
>WENV180012249
FLSK01295315
271164
Gammaproteobacteria
CCG
Arg
>WENV180011469
FLSK01003099
653844
Gammaproteobacteria
TTG
Gln
>WENV180011470
FLSK01003099
653844
Gammaproteobacteria
TTG
Gln
>WENV180011628
FLSK01010073
653844
Gammaproteobacteria
TTG
Gln
>WENV180011999
FLSK01123412
653844
Gammaproteobacteria
TTG
Gln
>WENV180011298
FLSK01001206
46098
Gammaproteobacteria
GGA
Ser
>WENV180011335
FLSK01001502
46098
Gammaproteobacteria
GGA
Ser
>WENV180011852
FLSK01066426
46098
Gammaproteobacteria
GGA
Ser
>WENV180012225
FLSK01279414
46098
Gammaproteobacteria
GGA
Ser
>WENV180012281
FLSK01322914
46098
Gammaproteobacteria
GGA
Ser
>WENV180012351
FLSK01376552
46098
Gammaproteobacteria
GGA
Ser
>WENV180011467
FLSK01003099
271283
Gammaproteobacteria
CAT
Met
>WENV180011482
FLSK01003121
112954
Gammaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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