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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180017303
FSWR01000077
277951
Actinomycetota
CAT
Met
>WENV180017271
FSWR01000042
452897
Actinomycetota
TAC
Val
>WENV180017265
FSWR01000032
277340
Actinomycetota
TGT
Thr
>WENV180017287
FSWR01000057
454668
Actinomycetota
CCA
Trp
>WENV180017273
FSWR01000048
476278
Actinomycetota
CTT
Lys
>WENV180017290
FSWR01000062
455138
Actinomycetota
TTC
Glu
>WENV180017291
FSWR01000062
273028
Actinomycetota
GTC
Asp
>WENV180017297
FSWR01000068
655047
Actinomycetota
GAC
Val
>WENV180017281
FSWR01000053
451775
Actinomycetota
TGC
Ala
>WENV180017272
FSWR01000043
655282
Actinomycetota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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