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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180018748
FTAI01000747
129311
Alphaproteobacteria
CAG
Leu
>WENV180018751
FTAI01000777
129311
Alphaproteobacteria
CAG
Leu
>WENV180018765
FTAI01001103
875984
Alphaproteobacteria
CCC
Gly
>WENV180018718
FTAI01000050
523841
Alphaproteobacteria
CGC
Ala
>WENV180018743
FTAI01000668
523841
Alphaproteobacteria
CGC
Ala
>WENV180018801
FTAI01001782
523795
Alphaproteobacteria
CGT
Thr
>WENV180018737
FTAI01000517
511228
Alphaproteobacteria
GGC
Ala
>WENV180018749
FTAI01000751
311632
Alphaproteobacteria
GGG
Pro
>WENV180018742
FTAI01000653
316080
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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