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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180026354
FTIT01002117
464602
Alphaproteobacteria
TTC
Glu
>WENV180026306
FTIT01001280
452757
Alphaproteobacteria
CAT
Met
>WENV180026422
FTIT01143575
452757
Alphaproteobacteria
CAT
Met
>WENV180026336
FTIT01001838
113518
Alphaproteobacteria
CAG
Leu
>WENV180026361
FTIT01002342
113518
Alphaproteobacteria
CAG
Leu
>WENV180026437
FTIT01209386
113518
Alphaproteobacteria
CAG
Leu
>WENV180026296
FTIT01001064
282797
Alphaproteobacteria
GTG
His
>WENV180026395
FTIT01037638
282797
Alphaproteobacteria
GTG
His
>WENV180026353
FTIT01002107
465568
Alphaproteobacteria
GGC
Ala
>WENV180026376
FTIT01007813
13460
Alphaproteobacteria
GCT
Ser
>WENV180026399
FTIT01054274
13460
Alphaproteobacteria
GCT
Ser
>WENV180026261
FTIT01000204
654017
Alphaproteobacteria
TGT
Thr
>WENV180026474
FTIT01478897
297864
Alphaproteobacteria
GTC
Asp
>WENV180026316
FTIT01001435
655361
Alphaproteobacteria
GCC
Gly
>WENV180026317
FTIT01001435
655361
Alphaproteobacteria
GCC
Gly
>WENV180026453
FTIT01288612
660487
Alphaproteobacteria
GCC
Gly
>WENV180026404
FTIT01063796
273364
Alphaproteobacteria
CAT
Met
>WENV180026478
FTIT01511268
780039
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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