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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180032082
FTJU01072114
308714
Alphaproteobacteria
CCG
Arg
>WENV180032089
FTJU01080905
509781
Alphaproteobacteria
CGC
Ala
>WENV180031880
FTJU01000431
871624
Alphaproteobacteria
GCA
Cys
>WENV180032075
FTJU01059199
877881
Alphaproteobacteria
GCA
Cys
>WENV180031943
FTJU01001855
511228
Alphaproteobacteria
GGC
Ala
>WENV180031917
FTJU01001305
524295
Alphaproteobacteria
GGC
Ala
>WENV180032032
FTJU01014368
311632
Alphaproteobacteria
GGG
Pro
>WENV180032067
FTJU01036556
734063
Alphaproteobacteria
GGT
Thr
>WENV180031923
FTJU01001458
743445
Alphaproteobacteria
GTT
Asn
>WENV180031902
FTJU01000889
514812
Alphaproteobacteria
TAC
Val
>WENV180032042
FTJU01019587
735264
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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